Unit 2: Plant Metabolism and Biochemistry Practicals

Table of Contents


1. Determination of Osmotic Potential by Plasmolytic Method

This practical aims to determine the osmotic potential of plant cell sap using the principle of plasmolysis. It utilizes the observation of cells in varying concentrations of a non-electrolyte solution like sucrose.

Principle

When a plant cell is placed in a hypertonic solution, water moves out of the cell, causing the protoplast to shrink away from the cell wall (plasmolysis). The incipient plasmolysis stage is the point where the protoplast just starts to detach from the cell wall. At this stage, the osmotic potential of the cell sap is approximately equal to the osmotic potential of the external solution.

Procedure

  1. Prepare a series of sucrose solutions of known molarity (e.g., 0.1M, 0.2M, 0.3M, 0.4M, 0.5M, 0.6M).
  2. Take thin epidermal peels of a plant (commonly Rhoeo discolor due to its colored sap).
  3. Place one peel in each solution for about 30 minutes.
  4. Examine the peels under a microscope and count the percentage of plasmolyzed cells in each concentration.
  5. Determine the concentration where 50% of the cells show incipient plasmolysis. This is the isotonic concentration.
OP = iCRT

Where:
i = Ionization constant (1 for sucrose)
C = Molar concentration at incipient plasmolysis
R = Gas constant (0.0821 liter-atm/degree/mol)
T = Absolute temperature (273 + room temperature in Celsius)

2. Effect of Carbon Dioxide on the Rate of Photosynthesis

This experiment investigates how the concentration of CO2, a primary substrate, affects the rate of photosynthesis in aquatic plants.

Principle

Photosynthesis uses CO2 and water in the presence of light and chlorophyll to produce glucose and oxygen. In aquatic plants like Hydrilla, the rate of photosynthesis can be measured by the rate of oxygen bubble evolution.

Experimental Setup

Observations

As the concentration of NaHCO3 increases (thereby increasing dissolved CO2), the number of bubbles produced per minute increases, up to a certain point where light or another factor becomes limiting.

Exam Tip: Limiting Factors

Remember Blackman's Law of Limiting Factors. If the CO2 concentration is very high but light is low, increasing CO2 further will not increase the rate. The rate is always determined by the factor in shortest supply.

3. Preparation of Solutions and Buffers

Foundational to biochemical work is the accurate preparation of solutions and the use of buffers to maintain stable environments.

Types of Solutions

Buffers

Definition: A buffer is a solution that resists changes in pH upon the addition of small amounts of an acid or a base.

Biological processes are highly pH-sensitive. Common laboratory buffers include Phosphate buffer and Tris-HCl buffer. Preparation involves mixing a weak acid with its conjugate base (or vice versa) in specific ratios calculated using the Henderson-Hasselbalch equation.

pH = pKa + log([Salt]/[Acid])

4. Separation of Amino Acids by Paper Chromatography

Chromatography is a technique used to separate mixtures based on the differential distribution of components between a stationary phase and a mobile phase.

Mechanism

Detection

Since amino acids are colorless, the paper is sprayed with Ninhydrin reagent and heated. This reacts with amino acids to produce a purple/violet color (except proline, which turns yellow).

Rf = Distance traveled by solute / Distance traveled by solvent front

Rf (Retention Factor) is constant for a specific substance under standard conditions and is used for identification.

5. Chlorophyll Separation by Paper Chromatography

This practical separates the different pigments involved in photosynthesis found in green leaves.

Pigments Separated

Pigment Color on Chromatogram Relative Position
Chlorophyll b Yellow-Green Lowest (most polar)
Chlorophyll a Blue-Green Above Chl b
Xanthophylls Yellow Above Chl a
Carotenes Orange-Yellow Highest (least polar)

Significance

Separation confirms that "chlorophyll" is actually a mixture of several pigments, each absorbing light at different wavelengths to maximize photosynthetic efficiency.

6. Exam Readiness & Viva Prep

Common Mistakes to Avoid

  • Plasmolysis: Not giving enough time (30 mins) for equilibrium. The cells won't show the true state of plasmolysis if checked too early.
  • Chromatography: Touching the paper with bare hands (oils from skin contain amino acids that will create "ghost" spots).
  • Solvent Front: Letting the solvent reach the very top of the paper. You must stop it before it reaches the end to calculate the Rf value correctly.

Frequently Asked Questions (Viva)

  1. Why is Rhoeo used for plasmolysis? Its sap is naturally colored (anthocyanin), making it easy to see the protoplast shrinking without staining.
  2. What is a "blank" in colorimetry/spectrophotometry? It's a solution containing everything except the substance being measured, used to set the baseline (zero) absorbance.
  3. Why is ninhydrin used in amino acid chromatography? It is a powerful oxidizing agent that reacts with the alpha-amino group to form a colored complex.

Mnemonics

Color Of Pigments (Bottom to Top): B-A-X-C (Blue-green, Apple-green/Blue-green, Xanthophyll, Carotene) - Wait, let's fix that:
Bring All Xtra Carrots (Chlorophyll b, a, Xanthophyll, Carotene).

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